Disabling hyperthreading won't do anything... at all.
If a program is single threaded, it's going to use only one core/thread even if you have a multicore CPU. If you disable half of the cores in a multicore CPU, it's still going to use only one core. It won't make any difference. The CPU isn't splitting the frequency between all four core (8 threads), each core/thread can run at a maximum of 3.4GHz (not taking into account turbo boost here). You can disable three cores and seven threads, that single core/thread is going to run at a maximum of 3.4GHz. It won't "speed up" because it's the only enabled core.
You should have gone with the i5-2500. The i5-2500 would have better suited you.
You really have two options here.
1) Overclock it. Since you purchased a 2600K instead of a 2600, you should at least use that 'K'. The 'K' denotes an unlocked multiplier. Only the 2500K and 2600K have unlocked multipliers. If you had no plans of overclocking, you shouldn't have spent extra for the unlocked multiplier.
2) Sell it. You're not utilizing even a fraction of this fantastic processor's power. Sell it and get an i5-2500 or a higher-end i3. I'd say go with the i3, as it is hyper threaded, but is only dual core.
You said it yourself, you don't have any applications that will utilize more than two cores. Having a quad core is senseless.